:py:mod:`autodeer.gui`
======================

.. py:module:: autodeer.gui



Submodules
----------
.. toctree::
   :titlesonly:
   :maxdepth: 1

   __main__/index.rst
   autoDEER_worker/index.rst
   log/index.rst
   main/index.rst
   modetune/index.rst
   quickdeer/index.rst
   test_main/index.rst
   tools/index.rst


Package Contents
----------------

Classes
~~~~~~~

.. autoapisummary::

   autodeer.gui.autoDEERUI
   autodeer.gui.WorkerSignals
   autodeer.gui.Worker



Functions
~~~~~~~~~

.. autoapisummary::

   autodeer.gui.create_save_name
   autodeer.gui.getCIstring
   autodeer.gui.load_epr_file
   autodeer.gui.get_sequence_rows
   autodeer.gui.fill_table
   autodeer.gui.read_table
   autodeer.gui.list_str_to_type
   autodeer.gui.str_to_list_type
   autodeer.gui.pyqt_table_from_dict
   autodeer.gui.param_in_us
   autodeer.gui.param_in_MHz
   autodeer.gui.test_SNR



.. py:class:: autoDEERUI


   Bases: :py:obj:`autodeer.gui.tools.QMainWindow`

   .. py:attribute:: logo_pixmap

      

   .. py:attribute:: q_DEER

      

   .. py:attribute:: longDEER

      

   .. py:attribute:: threadpool

      

   .. py:attribute:: current_results

      

   .. py:attribute:: current_data

      

   .. py:attribute:: pulses

      

   .. py:attribute:: spectromterInterface
      :value: 'None'

      

   .. py:attribute:: waitCondition
      :value: 'None'

      

   .. py:attribute:: queue

      

   .. py:attribute:: docs_url

      

   .. py:attribute:: github_url

      

   .. py:attribute:: issues_url

      

   .. py:attribute:: discussion_url

      

   .. py:attribute:: current_folder
      :value: 'None'

      

   .. py:attribute:: config
      :value: 'None'

      

   .. py:attribute:: connected
      :value: 'False'

      

   .. py:attribute:: DL_params

      

   .. py:attribute:: worker
      :value: 'None'

      

   .. py:attribute:: starttime

      

   .. py:attribute:: Bruker
      :value: 'False'

      

   .. py:attribute:: userinput

      

   .. py:attribute:: LO
      :value: '0'

      

   .. py:attribute:: gyro
      :value: '0.002803632236095'

      

   .. py:attribute:: cores
      :value: '1'

      

   .. py:attribute:: Min_tp
      :value: '12'

      

   .. py:attribute:: deer_settings

      

   .. py:attribute:: priorties

      

   .. py:attribute:: correction_factor
      :value: '1'

      

   .. py:method:: set_spectrometer_connected_light(state)


   .. py:method:: load_folder(*args, folder_path=None)


   .. py:method:: load_epr_file(store_location)


   .. py:method:: load_spectrometer_config(filename=None)


   .. py:method:: select_resonator()


   .. py:method:: change_LO()


   .. py:method:: connect_spectrometer()


   .. py:method:: raise_warning(message)


   .. py:method:: save_data(dataset, experiment)


   .. py:method:: fsweep_toolbar()


   .. py:method:: respro_toolbar()


   .. py:method:: relax_toolbar()


   .. py:method:: update_fieldsweep(dataset=None)


   .. py:method:: create_fieldsweep_figure()


   .. py:method:: refresh_fieldsweep_after_fit(fitresult)


   .. py:method:: update_respro(dataset=None)


   .. py:method:: create_respro_figure()


   .. py:method:: refresh_respro(*args)


   .. py:method:: optimise_pulses_button()


   .. py:method:: optimise_pulses(pulses=None)


   .. py:method:: update_optimise_pulses_figure()


   .. py:method:: update_relax(dataset=None)


   .. py:method:: create_relax_figure()


   .. py:method:: refresh_relax_figure()


   .. py:method:: refresh_relax(fitresult)


   .. py:method:: initialise_deer_settings()


   .. py:method:: update_deer_settings()


   .. py:method:: update_relax2D(dataset=None)


   .. py:method:: update_T2(dataset=None)


   .. py:method:: check_T2(fitresult)


   .. py:method:: check_CP(fitresult)


   .. py:method:: refresh_T2(fitresult)


   .. py:method:: advanced_mode_inputs()


   .. py:method:: update_quickdeer(dataset=None)


   .. py:method:: update_longdeer(dataset=None)


   .. py:method:: update_reptime(dataset=None)


   .. py:method:: timeout()

      
      Creates a pop up box as the experiment has timed out
















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   .. py:method:: clear_all()


   .. py:method:: RunAutoDEER(advanced=False)


   .. py:method:: RunFullyAutoDEER()


   .. py:method:: RunAdvancedAutoDEER()


   .. py:method:: create_report()



.. py:function:: create_save_name(SampleName, experiment, timestamp=True, ProjectName=None, Comment=None)


.. py:function:: getCIstring(Uncert, precision=2)


.. py:function:: load_epr_file(Object, store_location)


.. py:function:: get_sequence_rows(Sequence, names)


.. py:function:: fill_table(table, headers, rows, rowcount=None)


.. py:function:: read_table(table)


.. py:function:: list_str_to_type(list, type=int)


.. py:function:: str_to_list_type(string, type=int)


.. py:function:: pyqt_table_from_dict(table, dict)


.. py:function:: param_in_us(param)


.. py:function:: param_in_MHz(param)


.. py:function:: test_SNR(Application, data)

   
   Raises an error box if the SNR of the signal is less than 1.


   :Parameters:

       **data** : _type_
           _description_














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.. py:class:: WorkerSignals


   Bases: :py:obj:`PyQt6.QtCore.QObject`

   
   Defines the signals available from a running worker thread.

   Supported signals are:

   finished
       No data

   error
       tuple (exctype, value, traceback.format_exc() )

   result
       object data returned from processing, anything

   progress
       int indicating % progress















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   .. py:attribute:: finished

      

   .. py:attribute:: error

      

   .. py:attribute:: result

      


.. py:class:: Worker(fn, *args, **kwargs)


   Bases: :py:obj:`PyQt6.QtCore.QRunnable`

   
   Worker thread

   Inherits from QRunnable to handler worker thread setup, signals and wrap-up.

   :param callback: The function callback to run on this worker thread. Supplied args and
                    kwargs will be passed through to the runner.
   :type callback: function
   :param args: Arguments to pass to the callback function
   :param kwargs: Keywords to pass to the callback function















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   .. py:attribute:: fn

      

   .. py:attribute:: args

      

   .. py:attribute:: kwargs

      

   .. py:attribute:: signals

      

   .. py:method:: run()

      
      Initialise the runner function with passed args, kwargs.
















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